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Synonyms:
   Brachypodium (falsebrome) 

Broader Terms:
   Brachypodieae 
   Brachypodium (false brome) 
   Poaceae (grass) 

More Specific:
   Brachypodium arbuscula 
   Brachypodium caespitosum 
   Brachypodium distachyon (purple falsebrome) 
   Brachypodium longiseta 
   Brachypodium mexicanum 
   Brachypodium phoenicoides (thinleaf false brome) 
   Brachypodium pinnatum (heath false brome) 
   Brachypodium pringlei 
   Brachypodium pubifolium 
   Brachypodium retusum 
   Brachypodium rupestre 
   Brachypodium sylvaticum (Ornamental Grass) 
   Tragus berteronianus (spiked burr grass) 
 
 
Latest Articles on Brachypodium sp. from uBioRSS
Arabinogalactan protein 31 (AGP31), a putative network-forming protein in A... - Annals of Botany - current issue


Brachypodium sylvaticum
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External Resources:

Common Names: false brome, falsebrome, false bromes



1.  Progress and challenges in sorghum biotechnology, a multi-purpose feedstock for the bioeconomy.LinkIT
Silva TN, Thomas JB, Dahlberg J, Rhee SY, Mortimer JC
Journal of experimental botany, 2021
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0

2.  Migration without interbreeding: Evolutionary history of a highly selfing Mediterranean grass inferred from whole genomes.LinkIT
Stritt C, Gimmi EL, Wyler M, Bakali AH, Skalska A, Hasterok R, Mur LAJ, Pecchioni N, Roulin AC
Molecular ecologyMol EcolMigration without interbreeding: Evolutionary history of a highly selfing Mediterranean grass inferred from whole genomes.10.1111/mec.16207Wild plant populations show extensive genetic subdivision and are far from the ideal of panmixia which permeates population genetic theory. Understanding the spatial and temporal scale of population structure is therefore fundamental for empirical population genetics - and of interest in itself, as it yields insights into the history and biology of a species. In this study we extend the genomic resources for the wild Mediterranean grass Brachypodium distachyon to investigate the scale of population structure and its underlying history at whole-genome resolution. A total of 86 accessions were sampled at local and regional scales in Italy and France, which closes a conspicuous gap in the collection for this model organism. The analysis of 196 accessions, spanning the Mediterranean from Spain to Iraq, suggests that the interplay of high selfing and seed dispersal rates has shaped genetic structure in B. distachyon. At the continental scale, the evolution in B. distachyon is characterized by the independent expansion of three lineages during the Upper Pleistocene. Today, these lineages may occur on the same meadow yet do not interbreed. At the regional scale, dispersal and selfing interact and maintain high genotypic diversity, thus challenging the textbook notion that selfing in finite populations implies reduced diversity. Our study extends the population genomic resources for B. distachyon and suggests that an important use of this wild plant model is to investigate how selfing and dispersal, two processes typically studied separately, interact in colonizing plant species.© 2021 The Authors. Molecular Ecology published by John Wiley & Sons Ltd.StrittChristophChttps://orcid.org/0000-0002-3167-6658Institute for Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.GimmiElena LELInstitute for Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.WylerMicheleMhttps://orcid.org/0000-0003-1097-5322Institute for Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.BakaliAbdelmonaim HAHNational Institute of Agronomy, Regional Center of Errachidia, Errachidia, Morocco.SkalskaAleksandraAInstitute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland.HasterokRobertRInstitute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland.MurLuis A JLAJhttps://orcid.org/0000-0002-0961-9817Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Wales, UK.PecchioniNicolaNResearch Centre for Cereal and Industrial Crops, CREA - Council for Agricultural Research and Economics, Foggia, Italy.RoulinAnne CAChttps://orcid.org/0000-0002-6668-3321Institute for Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.engSNSF_Swiss National Science FoundationSwitzerlandUniversity of Zurich Research priority program "Evolution in Action"Journal Article20211003EnglandMol Ecol92144780962-1083IMflowering timeheterozygositypopulation structureseed dispersalselfing20210907202101192021092820211046020211046020211032114aheadofprint3460178710.1111/mec.16207REFERENCES, 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br>3.  <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0 class=title>Integrated Analysis of MicroRNA and Target Genes in <i>Brachypodium distachyon</i> Infected by <i>Magnaporthe oryzae</i> by Small RNA and Degradome Sequencing.</a><a href=http://ubio.org/tools/linkit.php?map%5B%5D=all&link_type=2&url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0><img src=linkit.png border=0 title='LinkIT' alt='LinkIT'></a> <br><span class=j>Peng W, Song N, Li W, Yan M, Huang C, Yang Y, Duan K, Dai L, Wang B<br><font color=gray><i>Frontiers in plant science, 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br>4.  <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0 class=title>Adaptive defence and sensing responses of host plant roots to fungal pathogen attack revealed by transcriptome and metabolome analyses.</a><a href=http://ubio.org/tools/linkit.php?map%5B%5D=all&link_type=2&url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0><img src=linkit.png border=0 title='LinkIT' alt='LinkIT'></a> <br><span class=j>Ding Y, Gardiner DM, Powell JJ, Colgrave ML, Park RF, Kazan K<br><font color=gray><i>Plant, cell & environmentPlant Cell EnvironAdaptive defence and sensing responses of host plant roots to fungal pathogen attack revealed by transcriptome and metabolome analyses.10.1111/pce.14195Plant root-produced constitutive and inducible defences inhibit pathogenic microorganisms within roots and in the rhizosphere. However, regulatory mechanisms underlying host responses during root-pathogen interactions are largely unexplored. Using the model species Brachypodium distachyon (Bd), we studied transcriptional and metabolic responses altered in Bd roots following challenge with Fusarium graminearum (Fg), a fungal pathogen that causes diseases in diverse organs of cereal crops. Shared gene expression patterns were found between Bd roots and spikes during Fg infection associated with the mycotoxin deoxynivalenol (DON). Overexpression of BdMYB78, an up-regulated transcription factor, significantly increased root resistance during Fg infection. We show that Bd roots recognize encroaching Fg prior to physical contact by altering transcription of genes associated with multiple cellular processes such as reactive oxygen species and cell development. These changes coincide with altered levels of secreted host metabolites detected by an untargeted metabolomic approach. The secretion of Bd metabolites was suppressed by Fg as enhanced levels of defence-associated metabolites were found in roots during pre-contact with a Fg mutant defective in host perception and the ability to cause disease. Our results help to understand root defence strategies employed by plants, with potential implications for improving the resistance of cereal crops to soil pathogens.© 2021 John Wiley & Sons Ltd.DingYiYhttps://orcid.org/0000-0002-1356-4863Agriculture and Food, Commonwealth Scientific and Industrial Research Organization, St Lucia, Queensland, Australia.The Plant Breeding Institute, School of Life & Environmental Sciences, Faculty of Science, The University of Sydney, Cobbitty, New South Wales, Australia.GardinerDonald MDMhttps://orcid.org/0000-0002-2162-8716Agriculture and Food, Commonwealth Scientific and Industrial Research Organization, St Lucia, Queensland, Australia.Queensland Alliance for Agriculture and Food Innovation (QAAFI), The University of Queensland, St Lucia, Queensland, Australia.PowellJonathan JJJAgriculture and Food, Commonwealth Scientific and Industrial Research Organization, St Lucia, Queensland, Australia.Queensland Alliance for Agriculture and Food Innovation (QAAFI), The University of Queensland, St Lucia, Queensland, Australia.ColgraveMichelle LMLhttps://orcid.org/0000-0001-8463-805XAgriculture and Food, Commonwealth Scientific and Industrial Research Organization, St Lucia, Queensland, Australia.Australian Research Council, Centre of Excellence for Innovations in Peptide and Protein Science, School of Science, Edith Cowan University, Joondalup, Western Australia, Australia.ParkRobert FRFThe Plant Breeding Institute, School of Life & Environmental Sciences, Faculty of Science, The University of Sydney, Cobbitty, New South Wales, Australia.KazanKemalKAgriculture and Food, Commonwealth Scientific and Industrial Research Organization, St Lucia, Queensland, Australia.Queensland Alliance for Agriculture and Food Innovation (QAAFI), The University of Queensland, St Lucia, Queensland, Australia.engCommonwealth Scientific and Industrial Research OrganisationUniversity of SydneyJournal Article20210930United StatesPlant Cell Environ93090040140-7791IMdefencefungal pathogensmetabolomeroot infectionroot-pathogen communicationsensingtranscriptome20210915202104192021092120211016020211016020219301238aheadofprint3459131910.1111/pce.14195REFERENCES, 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br>5.  <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0 class=title>Suppression of Phytochrome-Interacting Factors Enhances Photoresponses of Seedlings and Delays Flowering With Increased Plant Height in <i>Brachypodium distachyon</i>.</a><a href=http://ubio.org/tools/linkit.php?map%5B%5D=all&link_type=2&url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0><img src=linkit.png border=0 title='LinkIT' alt='LinkIT'></a> <br><span class=j>Hoang QTN, Tripathi S, Cho JY, Choi DM, Shin AY, Kwon SY, Han YJ, Kim JI<br><font color=gray><i>Frontiers in plant science, 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br>6.  <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0 class=title>Diversity in non-linear responses to soil moisture shapes evolutionary constraints in Brachypodium.</a><a href=http://ubio.org/tools/linkit.php?map%5B%5D=all&link_type=2&url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0><img src=linkit.png border=0 title='LinkIT' alt='LinkIT'></a> <br><span class=j>Monroe JG, Cai H, Des Marais DL<br><font color=gray><i>G3 (Bethesda, Md.), 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br>7.  <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0 class=title>Ammonium nutrition interacts with iron homeostasis in Brachypodium distachyon.</a><a href=http://ubio.org/tools/linkit.php?map%5B%5D=all&link_type=2&url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0><img src=linkit.png border=0 title='LinkIT' alt='LinkIT'></a> <br><span class=j>De la Peña M, Javier Marín-Peña A, Urmeneta L, Coleto I, Castillo-González J, van Liempd SM, Falcón-Pérez JM, Álvarez-Fernández A, González-Moro MB, Marino D<br><font color=gray><i>Journal of experimental botany, 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br>8.  <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0 class=title>Brachypodium distachyon UNICULME4 and LAXATUM-A are redundantly required for development.</a><a href=http://ubio.org/tools/linkit.php?map%5B%5D=all&link_type=2&url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0><img src=linkit.png border=0 title='LinkIT' alt='LinkIT'></a> <br><span class=j>Liu S, Magne K, Daniel S, Sibout R, Ratet P<br><font color=gray><i>Plant physiology, 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br>9.  <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0 class=title>Analysis of Codon Usage Patterns of Six Sequenced <i>Brachypodium distachyon</i> Lines Reveals a Declining CG Skew of the CDSs from the 5'-ends to the 3'-ends.</a><a href=http://ubio.org/tools/linkit.php?map%5B%5D=all&link_type=2&url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0><img src=linkit.png border=0 title='LinkIT' alt='LinkIT'></a> <br><span class=j>Wang J, Lin Y, Xi M<br><font color=gray><i>Genes, 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br>10.  <a href=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0 class=title>p-Coumaroylation of poplar lignins impacts lignin structure and improves wood saccharification.</a><a href=http://ubio.org/tools/linkit.php?map%5B%5D=all&link_type=2&url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0><img src=linkit.png border=0 title='LinkIT' alt='LinkIT'></a> <br><span class=j>Lapierre C, Sibout R, Laurans F, Lesage-Descauses MC, Déjardin A, Pilate G<br><font color=gray><i>Plant physiology, 2021</i></font><br><font color=#008000>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=0<br></font></span><br><br><br><table cellspacing=0 cellpadding=0 align=center><tr valign=bottom><td align=center><img src=p.png border=0></td><td align=center><img src=o_red.png border=0></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=2><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=3><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=4><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=5><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=6><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=7><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=8><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=9><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=10><img src=o_yellow.png border=0></a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=2><img src=rtal.png border=0></a></td></tr><td align=center></td><td align=center>1</td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=2>2</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=3>3</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=4>4</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=5>5</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=6>6</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=7>7</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=8>8</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=9>9</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=10>10</a></td><td align=center><a href=http://ubio.org/portal/index.php?search=Brachypodium+sp.&category=l&client=pubmed&startPage=2>»</a></td></tr></table></table></tr></table></td><script src="http://www.google-analytics.com/urchin.js" type="text/javascript"> </script> <script type="text/javascript"> _uacct = "UA-634822-1"; urchinTracker(); </script> </BODY> </HTML>